ProCKSI

= Documentation and Resources Centre for ProCKSI =
== A Decision Support System for Protein (Structure) Comparison, Knowledge, Similarity, and Information ==

* [wiki:ProjectOverview Project Overview] - Project description, funding, and main collaborators
* [wiki:DocuPublications Main Publications] - Main ProCKSI related papers, posters, presentations, ...
* [wiki:DocuLiterature Further Literature] - Further ProCKSI related literature

== Users Guide ==
* [wiki:TicketingHowto Ticketing Howto] - Report defects, request enhancements or new features

== Developers Guide ==

== Installation Guide ==
* [wiki:InstallationGuide Installation Guide] - How to install and setup ProCKSI

=== System Overview: Hardware, Software ===
* [wiki:SystemDescription System Overview] - Cluster description, IP addresses, backup, ...
* [wiki:SoftwareOverview Software Overview]
* [wiki:UrlEmailForwarding URL and Email Forwarding]

=== Operating System: Installation and Configuration ===
* [wiki:OperatingSystemInstallation Operating System Installation]
* [wiki:SystemUpdates System Updates]
* [wiki:Users User Management]
* [wiki:Networking Networking] - Network, Firewall, Host Name Resolution
* [wiki:TimeSynchronisation Time Synchronisation] - NTP
* [wiki:DataAccess Data Access] - NFS
* [wiki:JobManagement Job Management] - Queuing System (torque, maui)
* [wiki:ClusterMonitoring Cluster Monitoring] - Ganglia, JobMonarch
* [wiki:ClusterBackup Cluster Backup]

=== ProCKSI Server: Installation and Configuration ===
* [wiki:ExternalSoftware External Software]
* [wiki:ProcksiFramework ProCKSI Framework]

=== Add-Ons ===
* [wiki:InstallPDSH Install PDSH] - How to install the Parallel Distributed Shell

== Development Policies ==
* [wiki:WikiPolicy Wiki Policy] - Label Wiki pages and attachments correctly
* [wiki:TicketingPolicy Ticketing Policy] - Handle tickets correctly
* [wiki:VersioningPolicy Versioning Policy] - Label versions and milestones correctly correctly
* [wiki:SubversionPolicy Subversion Policy] - Use the SVN repository correctly
* [wiki:CorporateDesign Corporate Design Policy] - Use logos and styles correctly

== System, Status and Monitoring ==
* [http://www.procksi.net/ganglia/ Cluster Monitoring] - Monitoring the cluster, including the queue
* [wiki:MailingLists Mailing Lists] Mailing lists for developers and users

== Development Concepts ==
* [wiki:DataManagement Data Management] - Problem space, dataset, methods, measures, ...
* [wiki:DataResources Data Resources] - Resources for datasets, similarity comparisons, other information, ...
* [wiki:DataStandardisation Data Standardisation] - Standardising data from different data sources

== Third Party Software ==
* [source:Externals Repository] - Repository for external software

== ''trac'' Related Links ==
* TracGuide - Built-in Documentation
* [http://trac.edgewall.org/ Trac Project] - Trac Open Source Project
* [http://trac-hacks.org/ Trac Hacks] - Plugins, Macros, ...
* [http://trac.edgewall.org/wiki/TracFaq Trac FAQ] - Frequently Asked Questions

For a complete list of local wiki pages, see TitleIndex.

== Restricted Area ==
* [wiki:Drafts] - Drafts of papers, ...