ProCKSI

= Documentation and Resources Centre for ProCKSI =
== A Decision Support System for Protein (Structure) Comparison, Knowledge, Similarity, and Information ==

* [wiki:ProjectOverview Project Overview] - Project description, funding, and main collaborators
* [wiki:DocuPublications Main Publications] - Main ProCKSI related papers, posters, presentations, ...
* [wiki:DocuLiterature Further Literature] - Further ProCKSI related literature

== Users Guide ==
* [wiki:TicketingHowto Ticketing Howto] - Report defects, request enhancements or new features

== Developers Guide ==
* [wiki:SystemDescription System Overview] - Cluster description, IP addresses, backup, ...
* [wiki:SoftwareOverview Software Overview]- Operating system, third party software, ...
* [wiki:UrlEmailForwarding URL and Email Forwarding]
* [wiki:ProteinNomenclature Protein Nomenclature]
* [wiki:SimilarityComparison Similarity Comparison Methods]
* [wiki:Datasets Datasets] - Datasets and how to label them

== Teamworking Policies ==
* [wiki:WikiPolicy Wiki Policy] - How to label and use Wiki pages
* [wiki:PublicationsPolicy Publications Policy] - How to lable publications for the Wiki and Repository
* [wiki:TicketingPolicy Ticketing Policy] - How to handle tickets
* [wiki:VersioningPolicy Versioning Policy] - How to label versions and milestones
* [wiki:SubversionPolicy Repository Policy] - How to use the SVN repository
* [wiki:CorporateDesign Corporate Design Policy] - How to use logos and styles correctly

== System, Status and Monitoring ==
* [wiki:InstallationGuide Installation Guide] - How to install and setup ProCKSI
* [http://www.procksi.net/ganglia/ Cluster Monitoring] - Monitoring the cluster, including the queue
* [wiki:MailingLists Mailing Lists] Mailing lists for developers and users

== Development Concepts ==
* [wiki:DataManagement Data Management] - Problem space, dataset, methods, measures, ...
* [wiki:DataResources Data Resources] - Resources for datasets, similarity comparisons, other information, ...
* [wiki:DataStandardisation Data Standardisation] - Standardising data from different data sources
* [wiki:DataStorage Data Storage] - Make results available for the Protein Multiverse

== ''trac'' Related Links ==
* TracGuide - Built-in Documentation
* [http://trac.edgewall.org/ Trac Project] - Trac Open Source Project
* [http://trac-hacks.org/ Trac Hacks] - Plugins, Macros, ...
* [http://trac.edgewall.org/wiki/TracFaq Trac FAQ] - Frequently Asked Questions

For a complete list of local wiki pages, see TitleIndex.

== Restricted Area ==
* [wiki:secureAuthentication Authentication] [wiki:Drafts] - Drafts of papers, ...