ProCKSI

= Publications =

This page provides access to all ProCKSI related '''Papers''', '''Posters''', '''Presentations''', '''Demonstrations''', and '''Tutorials'''.br
When adding new publications, please refer to the [wiki:WikiPolicy Wiki Policy] on how files should be named.

Papers ||2007|| * '''A.A. Shah, D. Barthel, and N. Krasnogor'''br
Grid and distributed public computing schemes for structural proteomics.br
In P. Thulasiraman, X. He, T. Li-Xu, M. Denko, R.K. Thulasiram, and L.T. Yang, editors, ''Proceedings of the 5th International Symposium on Parallel and Distributed Processing and Applications (ISPA'07)''.br
Lecture Notes in Computer Science. Springer (to appear), 2007. ||2006|| * '''D. Barthel, J.D. Hirst, J. Blacewicz, and N. Krasnogor'''br
ProCKSI: A Metaserver for Protein Comparison using Kolmogorov and other Similarity Measures.br
In ''Late Breaking Papers. European Conference on Computational Biology'', 2006.br
Eilat, Israel, 2006. Peer reviewed CDROM publication. ||2005|| * '''D.A. Pelta, N. Krasnogor, C. Bousono-Calzon, J.L. Verdegay, J. Hirst, and E.K. Burke'''br
A fuzzy sets based generalization of contact maps for the overlap of protein structures.br
''Journal of Fuzzy Sets and Systems'', 152(2):103-123, 2005. * '''D.A. Pelta, J.R. Gonzales, and N. Krasnogor'''br
Protein structure comparison through fuzzy contact maps and the universal similarity metric.br
In ''Fourth Conference of the European Society for Fuzzy Logic and Technology and 11 Recontres Francophones sur la Logique Floue et ses Applications (EUSFLAT-LFA'05)'', 1124-1129, Barcelona, Spain, 2005. ||2004|| * '''N. Krasnogor'''br
Self-generating metaheuristics in bioinformatics: the protein structure comparison case.br
''Genetic Programming and Evolvable Machines'', 5(2):181-201, 2004. * '''N. Krasnogor and D.A. Pelta'''br
Measuring the similarity of protein structures by means of the universal similarity metric.br
''Bioinformatics'', 20(7):1015-1021, 2004. Posters ||'''Year''' ||'''Conference/Event'''||'''Main Author''' || '''Download as''' ||2007 ||European Conference on Computational Biology (ECCB'06), Eilat, Israel||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Poster_2007_ECCB06_DanielBarthel.ppt?format=raw PPT] ||2006 ||All Hands Meeting (AHM'06), Nottingham, UK||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Poster_2006_AHM_DanielBarthel.ppt PPT] ||2005 ||Grantholders Workshop, Manchester, UK||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Poster_2005_GrantholdersWorkshop_DanielBarthel.ppt PPT] Presentations ||'''Year''' ||'''Conference/Event''' ||'''Topic/Keywords''' || '''Main Presentator''' || '''Download as''' ||2007 ||Research Away Day (RAD'07), Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_RAD_DanielBarthel.ppt?format=raw PPT] ||2007 ||ASAP, Next Generation Decision Support - EPSRC Evaluation, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_ASAP_NGDS-Evaluation_DanielBarthel.ppt?format=raw PPT] ||2007 ||ASAP, Next Generation Decision Support - Workshop 1, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_ASAP_NGDS-Workshop1_DanielBarthel.ppt?format=raw PPT] ||2007 ||ASAP, Journal Club, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_ASAP_JournalClub_DanielBarthel.ppt?format=raw PPT] ||2007 ||ASAP, Group Seminar, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_ASAP_DanielBarthel.ppt?format=raw PPT] ||2007 ||ASAP, CASP Workshop, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2007_ASAP_CASP_DanielBarthel.ppt?format=raw PPT] ||2006 ||CNIO, Group Seminar, Madrid, Spain || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_CNIO_DanielBarthel.ppt?format=raw PPT] ||2006 ||East Midlands Proteomics Workshop (EMPW'06), Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_EMPW_DanielBarthel.ppt?format=raw PPT] ||2006 ||Research Away Day (RAD'06), Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_RAD_DanielBarthel.ppt?format=raw PPT] ||2006 ||ASAP, Group Seminar, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_ASAP_DanielBarthel.ppt?format=raw PPT] ||2006 ||ASAP, CASP Workshop, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_ASAP_CASP_DanielBarthel.ppt?format=raw PPT] ||2006 ||School of Chemistry, Group Seminar, Nottingham, UK || ||Daniel Barthel|| [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Presentation_2006_SchoolOfChemistry_DanielBarthel.ppt?format=raw PPT] Demonstrations ||'''Year''' ||'''Conference/Event'''||'''Main Demonstrator''' || '''Download as''' ||2006 ||All Hands Meeting (AHM'06), Nottingham, UK ||Daniel Barthel || Part 1: [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Demonstration_2006_AHM_Part1_DanielBarthel.ppt?format=raw PPT] || ||& School of Chemistry, Group Seminar, Nottingham, UK || || Part 2: [https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Demonstration_2006_AHM_Part2_DanielBarthel.ppt?format=raw PPT] ||2005 ||Grantholders Workshop, Manchester, UK ||Daniel Barthel || Tutorials ||'''Year''' ||'''Conference/Event''' ||'''Topic / Keywords''' ||'''Main Tutor''' || '''Download as''' ||2006 ||ASAP, Journal Club, Nottingham, UK ||Cluster Analysis and Validation||Daniel Barthel ||[https://psiren.cs.nott.ac.uk/projects/procksi/browser/Publications/Tutorial_2006_ASAP_ClusterAnalysis_DanielBarthel.ppt PPT]