Bug #3
Structrues excluded from calculation when not enough atoms
| Status: | Closed | Start date: | ||
|---|---|---|---|---|
| Priority: | High | Due date: | ||
| Assignee: | Anonymous | % Done: | 0% | |
| Category: | ProCKSI | |||
| Target version: | - | |||
| Resolution: | fixed |
Description
When structures do not have enough selected atoms, no .sa file is generated. Nor are .dm, .cm, .ac, .rc, and .cn files generated which are use by USM and MaxCMO.
=> These methods do give similarity matrices for the full dataset.
=> SSMs cannot be combined.
Possible solution (pre-processing):
- Check for minimum number of structures, atoms, selected atoms before request is submitted
Possible solution (post-processing):
- Enter all values into database
- Generate SSMs on-the-fly
- Correct for missing data
- Combine SSMs on-the-fly
History
#1 Updated by Anonymous over 16 years ago
- Status changed from New to Closed
- Resolution set to fixed
(In r505) f - New similarity comparison method: Vorolign
e - New design with better navigation
f - Customisable visualisation for contact maps as images and graphs
f - Customisable notification emails for finished experiments/tasks
f - Improved data security with authentication
e - Improved scheduling of all tasks
closes #3, #5, #2, #35, #42, #24, #26, #52, #32, #11, #40, #22
#2 Updated by Anonymous over 16 years ago
(In r506) f - New similarity comparison method: Vorolign
e - New design with better navigation
f - Customisable visualisation for contact maps as images and graphs
f - Customisable notification emails for finished experiments/tasks
f - Improved data security with authentication
e - Improved scheduling of all tasks
closes #3, #5, #2, #35, #42, #24, #26, #52, #32, #11, #40, #22